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feat(python-notebook-migration): add database tables for Notebook Migration tool#5055

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mengw15 merged 14 commits into
apache:mainfrom
zyratlo:migration-tool-database-tables
Jun 5, 2026
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feat(python-notebook-migration): add database tables for Notebook Migration tool#5055
mengw15 merged 14 commits into
apache:mainfrom
zyratlo:migration-tool-database-tables

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@zyratlo

@zyratlo zyratlo commented May 13, 2026

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What changes were proposed in this PR?

This PR adds two new tables to the database, notebook and workflow_notebook_mapping. These tables will be used in the new Python Notebook Migration tool to store the user-uploaded notebook and the generated mapping between the notebook and workflow.

Any related issues, documentation, discussions?

Closes #5054
The parent issue is #4301

Schema

image

How was this PR tested?

New tables were manually confirmed to be created successfully and usable.

Was this PR authored or co-authored using generative AI tooling?

No

@github-actions github-actions Bot added the ddl-change Changes to the TexeraDB DDL label May 13, 2026
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codecov-commenter commented May 13, 2026

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Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 49.94%. Comparing base (7deed35) to head (de5458c).

Additional details and impacted files
@@             Coverage Diff              @@
##               main    #5055      +/-   ##
============================================
- Coverage     51.59%   49.94%   -1.65%     
+ Complexity     2420     2419       -1     
============================================
  Files          1056     1054       -2     
  Lines         41046    40752     -294     
  Branches       4407     4372      -35     
============================================
- Hits          21176    20355     -821     
- Misses        18631    19170     +539     
+ Partials       1239     1227      -12     
Flag Coverage Δ *Carryforward flag
access-control-service 41.89% <ø> (ø)
agent-service 33.76% <ø> (ø) Carriedforward from 34be37d
amber 52.22% <ø> (-0.02%) ⬇️
computing-unit-managing-service 1.38% <ø> (ø)
config-service 54.68% <ø> (ø)
file-service 38.42% <ø> (ø)
frontend 42.10% <ø> (-4.15%) ⬇️ Carriedforward from 34be37d
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python 90.84% <ø> (ø) Carriedforward from 34be37d
workflow-compiling-service 58.39% <ø> (ø)

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@mengw15 mengw15 self-requested a review May 13, 2026 20:47
@mengw15

mengw15 commented May 18, 2026

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Please check this pr: #4401, for database changes

@zyratlo

zyratlo commented May 18, 2026

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Please check this pr: #4401, for database changes

I have addressed this issue

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Left some comments

Comment thread sql/updates/23.sql Outdated
Comment thread sql/texera_ddl.sql
Comment thread sql/texera_ddl.sql

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LGTM

@mengw15 mengw15 added this pull request to the merge queue Jun 5, 2026
@github-merge-queue github-merge-queue Bot removed this pull request from the merge queue due to no response for status checks Jun 5, 2026
@mengw15 mengw15 added this pull request to the merge queue Jun 5, 2026
Merged via the queue into apache:main with commit 8a4cb29 Jun 5, 2026
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yangzhang75 pushed a commit to yangzhang75/texera that referenced this pull request Jun 22, 2026
…ration tool (apache#5055)

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### What changes were proposed in this PR?
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This PR adds two new tables to the database, `notebook` and
`workflow_notebook_mapping`. These tables will be used in the new Python
Notebook Migration tool to store the user-uploaded notebook and the
generated mapping between the notebook and workflow.


### Any related issues, documentation, discussions?
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already.
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Closes apache#5054
The parent issue is apache#4301

#### Schema
<img width="1580" height="838" alt="image"
src="https://github.com/user-attachments/assets/33896320-56c5-45d6-bbd4-6d74fc365a49"
/>


### How was this PR tested?
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New tables were manually confirmed to be created successfully and
usable.

### Was this PR authored or co-authored using generative AI tooling?
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PR,
please include the phrase: 'Generated-by: ' followed by the name of the
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No

---------

Co-authored-by: Meng Wang <mengw15@uci.edu>
PG1204 pushed a commit to PG1204/texera that referenced this pull request Jun 25, 2026
…service in backend (apache#5258)

### What changes were proposed in this PR?
Introduces the microservice that mediates between Texera and the
JupyterLab docker stack landed in `migration-tool-jupyter-docker`. Adds
a new SBT subproject `notebook-migration-service` plus shared config and
a frontend dev-proxy route.

**New SBT subproject `notebook-migration-service/`:**

- **`build.sbt`** and **`project/build.properties`** — module SBT setup;
module depends on the existing `Auth`, `Config`, and `DAO` projects
- **`src/main/scala/.../NotebookMigrationService.scala`** — Dropwizard
`Application` entry point; sets Jersey URL pattern to `/api/*`,
registers the resource class, initializes the shared SQL connection via
`SqlServer.initConnection(StorageConfig.jdbcUrl, …)`, and wires in
`RequestLoggingFilter`.
- **`src/main/scala/.../NotebookMigrationServiceConfiguration.scala`** —
Dropwizard `Configuration` subclass.
- **`src/main/scala/.../resource/NotebookMigrationResource.scala`** —
five REST endpoints under `/notebook-migration`:
- `GET /get-jupyter-url` — health-checks the Jupyter container and
returns its base URL.
- `GET /get-jupyter-iframe-url` — returns the iframe-ready URL for
`notebook.ipynb`.
- `POST /set-notebook` — receives a notebook JSON, PUTs it into
JupyterLab via its `/api/contents/work/{name}` API.
- `POST /store-notebook-and-mapping` — persists a notebook +
workflow-notebook mapping into Postgres in a single transaction (writes
to the `notebook` and `workflow_notebook_mapping` tables added by
`migration-tool-database-tables`).
- `POST /fetch-notebook-and-mapping` — returns the most recent notebook
+ mapping for a given (wid, vid).
  - **`src/main/resources/logback.xml`** — logging config.
- **`src/main/resources/notebook-migration-service-web-config.yaml`** —
Dropwizard server config (HTTP port `9098`, DB connection refs).

  **Root build wiring:**
- **`build.sbt`** — declares the new `NotebookMigrationService` SBT
subproject and adds it to the `TexeraProject` aggregation.

  **Shared config:**
- **`common/config/src/main/resources/storage.conf`** — new `jupyter {
url = "http://localhost:9100" }` block, overridable via
`STORAGE_JUPYTER_URL`.
- **`common/config/src/main/scala/.../StorageConfig.scala`** — adds the
`jupyterURL` accessor.

  **Frontend dev proxy:**
- **`frontend/proxy.config.json`** — routes `/api/notebook-migration/*`
to `http://localhost:9098`.


### Any related issues, documentation, discussions?
Closes apache#5257 
Parent issue apache#4301 
- Hard dependency: **must be merged after
`migration-tool-database-tables`** apache#5055 — the resource imports
jOOQ-generated `Notebook` / `WorkflowNotebookMapping` classes that only
exist once the schema PR is merged.
- Soft dependency: the JupyterLab container from
`migration-tool-jupyter-docker` is what `StorageConfig.jupyterURL`
points to. Without it running, the Jupyter-related endpoints return a
500 with `"Cannot connect to Jupyter server"`. Service still starts and
the DB-persistence endpoints work in isolation.

### How was this PR tested?



### Was this PR authored or co-authored using generative AI tooling?
Generated-by: Claude Code (Claude Opus 4.7)

---------

Signed-off-by: Ryan Zhang <97552093+zyratlo@users.noreply.github.com>
Co-authored-by: Copilot Autofix powered by AI <175728472+Copilot@users.noreply.github.com>
Co-authored-by: Meng Wang <mengw15@uci.edu>
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[Notebook Migration] 1. Add Database Tables

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