This repository was archived by the owner on Jun 18, 2026. It is now read-only.
What's Changed - these were already part of 4.0.6 tagged version.
- Bug Fix in integrateBatches.R URD call by @wong-nw in #449
- Improved QC Reports - June 2020 (NW) by @wong-nw in #451
- ChIP-seq improvements by @tovahmarkowitz in #460
- scRNA QC and integration fixes by @wong-nw in #463
- Fixing reference to /scratch in novocraft sort rule in activeDev by @mtandon09 in #466
- Fixing reference to /scratch in novocraft sort rule by @mtandon09 in #465
- (master branch) Run freec only for hg38 and hg19 by @mtandon09 in #468
- Run freec only for hg38 and hg19 by @mtandon09 in #467
- ChIP-seq pipeline improvements by @tovahmarkowitz in #472
- Merge activeDev 4.0.6 into master by @slsevilla in #483
What's changed: these were NOT part of 4.0.6 merge
- ChIP-seq updates: estimated fragment length and more by @tovahmarkowitz in #450
Full Changelog: v4.0.2...v4.0.7
Contributors
mtandon09, slsevilla, and 2 other contributors